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abyss-pipeline
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  • abyss-project
  • abyss-pipeline
  • Issues

  • Open 2
  • Closed 25
  • All 27
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual Blocking
  • Update readme please
    #34 · opened Jan 19, 2021 by BRANDT
    • 0
    updated Jan 29, 2021
  • Slides for practical pipeline use
    #33 · opened May 07, 2020 by BRANDT
    • CLOSED
    • 3
    updated May 11, 2020
  • explanation frogs_process vs frogs_only
    #32 · opened May 07, 2020 by BRANDT
    • CLOSED
    • 3
    updated May 11, 2020
  • final pipeline correction/dernière correction abyss-pipeline
    #31 · opened Apr 22, 2020 by BRANDT
    • 6
    updated Jan 29, 2021
  • For COI missing .fasta.properties files
    #30 · opened Feb 05, 2020 by GUNTHER   Feb 7, 2020
    • CLOSED
    • 3
    updated Feb 11, 2020
  • Problème de dadamerge avec le V9
    #28 · opened Jan 19, 2020 by ARNAUD-HAOND
    • CLOSED
    • 2
    updated Jan 22, 2020
  • Bug lors de la réintégration de la double PCR
    #27 · opened Jan 12, 2020 by ARNAUD-HAOND
    • CLOSED
    • 14
    updated Feb 02, 2020
  • Modifier le readme.txt
    #25 · opened Jul 30, 2019 by ARNAUD-HAOND
    • CLOSED
    • 1
    updated Jul 30, 2019
  • Revue des paramètres pour dada2, blast et lulu
    #22 · opened Apr 26, 2019 by QUINTRIC
    • CLOSED
    • 11
    updated May 13, 2019
  • Implementation of the Bayesian RDP-classifier taxonomic assignment method in ABYSS pipeline
    #21 · opened Apr 10, 2019 by BRANDT
    • CLOSED
    • 17
    updated Feb 04, 2020
  • Ajout du package DECIPHER pour assignation taxonomique des ASVs avec IdTaxa
    #19 · opened Feb 27, 2019 by TROUCHE
    • CLOSED
    • 1
    updated Mar 04, 2019
  • Concatenate sanger sequences to reference databases
    #18 · opened Dec 20, 2018 by COWART   Jan 10, 2019
    • CLOSED
    • 7
    updated Apr 16, 2019
  • augmentation des ressources utilisées par extract.pbs
    #17 · opened Dec 20, 2018 by BRANDT   Dec 20, 2018
    • CLOSED
    • 0
    updated Apr 16, 2019
  • Tri des fichiers de séquences du Genoscope en fonction du run de séquençage pour Dada2
    #16 · opened Dec 17, 2018 by BRANDT   Dec 20, 2018
    • CLOSED
    • 1
    updated Dec 20, 2018
  • Probleme dada2 avec le nouveau script de dada2 incluant coi
    #15 · opened Dec 05, 2018 by BRANDT   Dec 6, 2018
    • CLOSED
    • 4
    updated Dec 10, 2018
  • Probleme Dada2 18SV4 et V9
    #13 · opened Nov 29, 2018 by BRANDT   Nov 30, 2018
    • CLOSED
    • 25
    updated Apr 16, 2019
  • Rajout d'une base de donnees SILVA 16S+18S sur datarmor
    #12 · opened Nov 28, 2018 by BRANDT
    • CLOSED
    • 3
    updated Nov 29, 2018
  • Integrer plus de resolution dans les assignations " multi-subject"
    #11 · opened Nov 27, 2018 by BRANDT   Nov 27, 2018
    • CLOSED
    • 6
    updated Nov 29, 2018
  • Possibilite d'integrer usearch_global comme algorithme d'assignation
    #10 · opened Nov 27, 2018 by BRANDT   Nov 27, 2018
    • CLOSED
    • 8
    updated Nov 29, 2018
  • Ajouter les bonnes bases de donnees dans le config (et si plusieurs alors mettre les autres en options commentees)
    #9 · opened Nov 23, 2018 by BRANDT   Nov 26, 2018
    • CLOSED
    • 2
    updated Nov 26, 2018
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