Commit 3010a453 authored by Laure QUINTRIC's avatar Laure QUINTRIC

add create frogs archive in check

parent 5da60e05
......@@ -80,7 +80,7 @@ if __name__ == '__main__':
logger.debug("Number of produced files is OK")
# create archive for frogs
cmd="cd {}/frogs; tar cvf samples.tar *_R*.fastq.gz && rm ${}/frogs/*_R*.fastq.gz".format(output,output)
cmd="cd {}/frogs; tar cvf samples.tar *_R*.fastq.gz && rm {}/frogs/*_R*.fastq.gz".format(output,output)
out = runcmd(cmd)
logger.debug("END OF CHECKING PROCESSS")
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