Commit 8a987c03 authored by Laure QUINTRIC's avatar Laure QUINTRIC

add create frogs archive in check

parent 034fc1d0
......@@ -79,4 +79,8 @@ if __name__ == '__main__':
else :
logger.debug("Number of produced files is OK")
# create archive for frogs
cmd="cd {}/frogs; tar cvf samples.tar *_{R1,R2}.fastq.gz && rm ${}/frogs/*_{R1,R2}.fastq.gz".format(output,output)
out = runcmd(cmd)
logger.debug("END OF CHECKING PROCESSS")
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